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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4945185 chr11:77318142 G/A INTS4L1 chr7:64601603-64694600:+ 0.36 6.21 1.17E-9 Box Plot
THCA rs4945220 chr11:77528161 C/G INTS4L1 chr7:64601603-64694600:+ -0.62 -10.05 1.05E-21 Box Plot
THCA rs4945228 chr11:77699154 C/T INTS4L1 chr7:64601603-64694600:+ 0.5 8.95 8.14E-18 Box Plot
THCA rs4947336 chr6:28576143 T/A BTN3A2 chr6:26365387-26378548:+ -0.79 -10.99 3.24E-25 Box Plot
THCA rs4947336 chr6:28576143 T/A RNF5P1 chr8:38458179-38458718:- 0.72 6.35 4.9E-10 Box Plot
THCA rs4947336 chr6:28576143 T/A ZFP57 chr6:29640169-29648887:- 0.95 9.03 4.29E-18 Box Plot
THCA rs494887 chr6:27850873 G/A BTN3A2 chr6:26365387-26378548:+ -0.35 -6.7 6.05E-11 Box Plot
THCA rs4949003 chr10:45984094 A/G AGAP7 chr10:51464162-51486327:- -0.35 -6.24 9.7E-10 Box Plot
THCA rs4951701 chr1:211166006 C/G CPNE6 chr14:24540046-24547309:+ 0.34 6.21 1.18E-9 Box Plot
THCA rs4956127 chr4:108610089 A/T MRPL38 chr17:73894724-73901494:- 0.27 6.08 2.43E-9 Box Plot
THCA rs4956128 chr4:108613684 T/C MRPL38 chr17:73894724-73901494:- 0.28 6.27 7.94E-10 Box Plot
THCA rs4958299 chr5:151682439 A/C FILIP1L chr3:99548985-99833357:- -0.21 -5.97 4.65E-9 Box Plot
THCA rs496108 chr5:49532628 C/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.64 1.16E-13 Box Plot
THCA rs4961406 chr8:20784766 T/G EHD4 chr15:42188137-42264776:- 0.43 5.9 6.86E-9 Box Plot
THCA rs4970802 chr1:109216479 C/T NKIRAS1 chr3:23933151-23988082:- 0.45 6.24 9.37E-10 Box Plot